The research, led by Dr. Sony Tuteja from the Perelman School of Medicine at the University of Pennsylvania and published in JCO Precision Oncology, explored whether screening for genetic variants prior to starting chemotherapy could guide drug dosing and improve patient safety. The focus was on two pharmacogenes—DPYD, which influences the breakdown of fluoropyrimidines, and UGT1A1, which affects the metabolism of irinotecan. Variants in these genes can increase the risk of severe toxicity from standard chemotherapy doses.
A total of 288 adults with gastrointestinal cancers were enrolled, and 225 received chemotherapy regimens qualifying for evaluation. All underwent genetic testing before initiating treatment, and when significant variants were identified, oncologists were advised to reduce the drug dose accordingly. The median turnaround time for test results was 10 days, and 57.4% of reports were available before the first treatment cycle. Among patients with actionable drug–gene interactions, nearly 70% had results in time to allow dose adjustments, and clinicians consistently followed the genotype-based recommendations.
Key findings:
- Severe treatment-related adverse events occurred in 38% of the tested group compared with 65% in the control group, though the difference was not statistically significant.
- Treatment modifications were significantly lower in the tested group at 38% compared with 76% in the control group.
- Treatment discontinuations decreased from 47% in the control group to 31% in the tested group.
- In patients carrying high-risk genetic variants, the incidence of severe toxicity dropped to rates similar to those seen in patients without such variants.
The trial also revealed practical challenges. In some cases, chemotherapy began before results were available, often because treatment needed to start urgently. The limited number of variant carriers reduced statistical power for some analyses, and differences in disease stage and performance status between groups may have influenced toxicity rates. The study did not track all adverse effects using formal grading criteria but instead recorded the most severe events, such as those requiring hospitalization or emergency care.
Despite these constraints, the findings support the value of incorporating DPYD/UGT1A1 testing into routine oncology practice for gastrointestinal cancers. By identifying patients at greater risk of drug-related toxicity before treatment starts, clinicians can tailor chemotherapy dosing to improve safety without sacrificing efficacy.
Dr. Tuteja and colleagues suggest that expanding access to genetic testing and ensuring results are available before treatment begins could further enhance outcomes, with future work aimed at streamlining testing processes and broadening adoption across cancer treatment centers.
Reference:
Sony Tuteja et al. Implementation of DPYD and UGT1A1 Testing in Patients With GI Cancer: A Prospective, Nonrandomized Clinical Trial. JCO Precis Oncol 9, e2500086(2025). DOI:10.1200/PO-25-00086
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